PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G039800.1.p
Common NamePRUPE_ppa016095mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 243aa    MW: 27311 Da    PI: 9.2725
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G039800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.5e-1471122155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         ++ +hn+ Er RR+++Ns ++ Lr+llP +   ++kKls   +  ++ +YI +Lq
  Prupe.7G039800.1.p  71 KKLNHNASERDRRKKMNSLYSSLRSLLPVD---QGKKLSIPNTISHVLKYIPELQ 122
                         6789**************************...*******************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.68770121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-1171122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.93E-471126No hitNo description
Gene3DG3DSA:4.10.280.104.5E-1171135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.15E-1471138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-876127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MLALSPPLFS TIAWPSEDLL SHDQNYFYRD SSIDQSAESF LHILPSHQPQ VDLDRSTTIS  60
GDYSGVSTMA KKLNHNASER DRRKKMNSLY SSLRSLLPVD QGKKLSIPNT ISHVLKYIPE  120
LQKLVEGLIR KRGELLSRAC KQEAAMHEEK RIKSTARSSS SAVSTYRLSD RAVAIQISTL  180
KTHNNLLSEI LLNLEEEGLQ VLNASSFQSS GGRVFYNIHL QVERADRLEC KNLSEKLMSF  240
YA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202904.11e-178hypothetical protein PRUPE_ppa016095mg
TrEMBLM5W4A41e-178M5W4A4_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g05300.t013e-92(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-41bHLH family protein